Transcript: lnc-LEO1-5:2

Basic information

LNCipedia transcript ID: lnc-LEO1-5:2 
LNCipedia gene ID: lnc-LEO1-5
Location (hg19): chr15:52221530-52222807
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 228 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1596:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -142.661 non-coding 
CPAT coding probability 56.74% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LEO1-5:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LEO1-5:2
4.1 lnc-LEO1-5:2
5.0 lnc-LEO1-5:2
5.1 lnc-DNAAF4-68:2
5.2 lnc-LEO1-5:2