Transcript: lnc-LGALS12-2:3

Basic information

LNCipedia transcript ID: lnc-LGALS12-2:3 
LNCipedia gene ID: lnc-LGALS12-2
Location (hg19): chr11:63262961-63268075
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 323 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00019318
Alternative gene names: XLOC_009152; linc-LGALS12


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.9727 non-coding 
CPAT coding probability 4.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LGALS12-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LGALS12-2:3
3.1 lnc-LGALS12-2:3
4.0 lnc-LGALS12-2:3
4.1 lnc-LGALS12-2:3
5.0 lnc-LGALS12-2:3
5.1 lnc-TMEM179B-17:3
5.2 lnc-LGALS12-2:3