Transcript: lnc-LGALS2-5:1

Basic information

LNCipedia transcript ID: lnc-LGALS2-5:1 
LNCipedia gene ID: lnc-LGALS2-5
Location (hg19): chr22:38069315-38073291
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3977 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000058602.1|FTMT28600001065.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.2489 non-coding 
CPAT coding probability 3.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LGALS2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LGALS2-5:1
5.0 lnc-LGALS2-5:1
5.1 lnc-MYH9-35:1
5.2 lnc-LGALS2-5:1