Transcript: lnc-LGALS3-1:4

Basic information

LNCipedia transcript ID: lnc-LGALS3-1:4 
LNCipedia gene ID: lnc-LGALS3-1
Location (hg19): chr14:55658464-55683695
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 839 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000019064.1|ENCT00000126147.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -2.2266 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LGALS3-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LGALS3-1:4
5.0 lnc-LGALS3-1:4
5.1 lnc-AP5M1-29:4
5.2 lnc-LGALS3-1:4