Transcript: lnc-LHFPL5-1:1

Basic information

LNCipedia transcript ID: lnc-LHFPL5-1:1 
LNCipedia gene ID: lnc-LHFPL5-1
Location (hg19): chr6:35888980-35889440
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 461 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000083724.1|FTMT22400003133.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -241.0775 non-coding 
CPAT coding probability 2.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LHFPL5-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LHFPL5-1:1
5.0 lnc-LHFPL5-1:1
5.1 lnc-PI16-35:1
5.2 lnc-LHFPL5-1:1