Transcript: lnc-LHX5-2:1

Basic information

LNCipedia transcript ID: lnc-LHX5-2:1 
LNCipedia gene ID: lnc-LHX5-2
Location (hg19): chr12:114032688-114039015
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 280 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT030848; FPKM1_group_7157_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.2968 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LHX5-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LHX5-2:1
4.0 lnc-LHX5-2:1
4.1 lnc-LHX5-2:1
5.0 lnc-LHX5-2:1
5.1 lnc-LHX5-2:1
5.2 lnc-LHX5-2:1