Transcript: lnc-LIN28B-9:1

Basic information

LNCipedia transcript ID: lnc-LIN28B-9:1 
LNCipedia gene ID: lnc-LIN28B-9
Location (hg19): chr6:105746024-105746770
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 747 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT114216
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.3985 non-coding 
CPAT coding probability 11.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LIN28B-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C6orf112-5:1
4.0 lnc-C6orf112-5:1
4.1 lnc-C6orf112-5:1
5.0 lnc-C6orf112-5:1
5.1 lnc-SMPD2-64:1
5.2 lnc-LIN28B-9:1