Transcript: lnc-LINC00854-1:27

Basic information

LNCipedia transcript ID: lnc-LINC00854-1:27 
LNCipedia gene ID: lnc-LINC00854-1
Location (hg19): chr17:41376466-41378394
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 705 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000619529.1
Alternative gene names: ENSG00000236383.7; LINC00854;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -238.9158 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LINC00854-1:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC00854:7
4.1 LINC00854:7
5.0 LINC00854:7
5.1 lnc-LINC00854-1:9
5.2 lnc-LINC00854-1:27