Transcript: lnc-LINC02210-CRHR1-52:20

Basic information

LNCipedia transcript ID: lnc-LINC02210-CRHR1-52:20 
LNCipedia gene ID: lnc-LINC02210-CRHR1-52
Location (hg19): chr17:43716341-43723374
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 654 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000585677.1
Alternative gene names: ENSG00000204650.13; CRHR1-IT1; FLJ25168


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.086 non-coding 
CPAT coding probability 2.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LINC02210-CRHR1-52:20 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 CRHR1-IT1:22
4.1 CRHR1-IT1:22
5.0 CRHR1-IT1:22
5.1 lnc-CCDC103-52:22
5.2 lnc-LINC02210-CRHR1-52:20