Transcript: lnc-LINC02210-CRHR1-52:23

Basic information

LNCipedia transcript ID: lnc-LINC02210-CRHR1-52:23 
LNCipedia gene ID: lnc-LINC02210-CRHR1-52
Location (hg19): chr17:43717670-43719667
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1197 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000300525.4; C17orf69-201
Alternative gene names: ENSG00000167159.5; C17orf69; OTTHUMG00000178254.1; FLJ25168


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.1614 non-coding 
CPAT coding probability 53.45% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LINC02210-CRHR1-52:23 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf69-1:2
4.0 CRHR1-IT1:24
4.1 CRHR1-IT1:24
5.0 CRHR1-IT1:24
5.1 lnc-CCDC103-52:25
5.2 lnc-LINC02210-CRHR1-52:23