Transcript: lnc-LINS1-2:3

Basic information

LNCipedia transcript ID: lnc-LINS1-2:3 
LNCipedia gene ID: lnc-LINS1-2
Location (hg19): chr15:101087972-101090358
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2387 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT140271; ENST00000602585.1
Alternative gene names: ENSG00000270127.1; RP11-526I2.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 39.8996 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LINS1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LINS-1:4
4.0 lnc-LINS-1:4
4.1 lnc-LINS-1:4
5.0 lnc-LINS-1:4
5.1 lnc-CIB1-104:3
5.2 lnc-LINS1-2:3