Transcript: lnc-LMBRD1-8:1

Basic information

LNCipedia transcript ID: lnc-LMBRD1-8:1 
LNCipedia gene ID: lnc-LMBRD1-8
Location (hg19): chr6:69246189-69286078
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1473 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000088791.1|MICT00000306178.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.2268 non-coding 
CPAT coding probability 5.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMBRD1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AL713998.1-8:1
5.0 lnc-AL713998.1-8:1
5.1 lnc-CEP162-91:1
5.2 lnc-LMBRD1-8:1