Transcript: lnc-LMLN-1:5

Basic information

LNCipedia transcript ID: lnc-LMLN-1:5 
LNCipedia gene ID: lnc-LMLN-1
Location (hg19): chr3:197880121-197925886
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2168 bp
Exons: 11
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT094493; ENST00000437428.2
Alternative gene names: ENSG00000236438.2; FAM157A


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 132.1006 coding 
CPAT coding probability 56.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LMLN-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM157A-1:2
4.0 lnc-FAM157A-1:2
4.1 lnc-FAM157A-1:2
5.0 lnc-FAM157A-1:2
5.1 lnc-LMLN-3:2
5.2 lnc-LMLN-1:5