Transcript: lnc-LMNTD2-3:1

Basic information

LNCipedia transcript ID: lnc-LMNTD2-3:1 
LNCipedia gene ID: lnc-LMNTD2-3
Location (hg19): chr11:573801-575885
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1668 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000500108; TCONS_00019162; NONHSAT017285
Alternative gene names: ENSG00000246532; XLOC_009350; linc-C11orf35; AP006284.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 50.6324 non-coding 
CPAT coding probability 16.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LMNTD2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C11orf35-2:1
3.1 lnc-C11orf35-3:1
4.0 lnc-C11orf35-3:1
4.1 lnc-C11orf35-3:1
5.0 lnc-C11orf35-3:1
5.1 lnc-OR52A1-95:1
5.2 lnc-LMNTD2-3:1