Transcript: lnc-LMO4-2:16

Basic information

LNCipedia transcript ID: lnc-LMO4-2:16 
LNCipedia gene ID: lnc-LMO4-2
Location (hg19): chr1:87668750-87688087
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 946 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000006749.1|MICT00000014475.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.4169 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMO4-2:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HS2ST1-2:3
5.0 lnc-HS2ST1-2:3
5.1 lnc-PKN2-9:1
5.2 lnc-LMO4-2:16