Transcript: lnc-LMTK3-1:1

Basic information

LNCipedia transcript ID: lnc-LMTK3-1:1 
LNCipedia gene ID: lnc-LMTK3-1
Location (hg19): chr19:48978357-48985570
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2022 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000500348
Alternative gene names: ENSG00000246646


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.8758 non-coding 
CPAT coding probability 10.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMTK3-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LMTK3-1:1
3.1 lnc-LMTK3-1:1
4.0 lnc-LMTK3-1:1
4.1 lnc-LMTK3-1:1
5.0 lnc-LMTK3-1:1
5.1 lnc-TMEM143-7:1
5.2 lnc-LMTK3-1:1