Transcript: lnc-LNPEP-4:1

Basic information

LNCipedia transcript ID: lnc-LNPEP-4:1 
LNCipedia gene ID: lnc-LNPEP-4
Location (hg19): chr5:96396070-96396412
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 343 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr5_5489_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.3382 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LNPEP-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LNPEP-4:1
4.0 lnc-LNPEP-4:1
4.1 lnc-LNPEP-4:1
5.0 lnc-LNPEP-4:1
5.1 lnc-GPR150-40:1
5.2 lnc-LNPEP-4:1