Transcript: lnc-LNPEP-5:2

Basic information

LNCipedia transcript ID: lnc-LNPEP-5:2 
LNCipedia gene ID: lnc-LNPEP-5
Location (hg19): chr5:96704480-96706125
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1646 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT102928
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.6537 non-coding 
CPAT coding probability 92.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LNPEP-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2215E18.1.1-5:1
4.0 lnc-CTD-2215E18.1.1-5:1
4.1 lnc-CTD-2215E18.1.1-5:1
5.0 lnc-CTD-2215E18.1.1-5:1
5.1 lnc-GPR150-42:1
5.2 lnc-LNPEP-5:2