Transcript: lnc-LONP2-6:9

Basic information

LNCipedia transcript ID: lnc-LONP2-6:9 
LNCipedia gene ID: lnc-LONP2-6
Location (hg19): chr16:48657348-48778553
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 546 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260086.1|ENST00000568150.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -195.547 non-coding 
CPAT coding probability 11.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LONP2-6:9 no no no no

Available literature

  1. Wang (2016), Transcriptome Analysis of Long Noncoding RNAs in Toll-Like Receptor 3-Activated Mesenchymal Stem Cells., Stem Cells Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LONP2-6:9
5.0 lnc-LONP2-6:9
5.1 lnc-ADGRG1-167:6
5.2 lnc-LONP2-6:9