Transcript: lnc-LONRF1-1:5

Basic information

LNCipedia transcript ID: lnc-LONRF1-1:5 
LNCipedia gene ID: lnc-LONRF1-1
RefSeq ID: NR_015383
Location (hg19): chr8:12623571-12668910
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 772 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT125182; NR_015383; NR_015383.1
Alternative gene names: LOC340357


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.6699 non-coding 
CPAT coding probability 26.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LONRF1-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LONRF1-1:5
4.0 lnc-LONRF1-1:5
4.1 lnc-LONRF1-1:5
5.0 lnc-LONRF1-1:5
5.1 lnc-PINX1-66:4
5.2 lnc-LONRF1-1:5