Transcript: lnc-LRCH1-1:1

Basic information

LNCipedia transcript ID: lnc-LRCH1-1:1 
LNCipedia gene ID: lnc-LRCH1-1
Location (hg19): chr13:47402276-47407401
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2120 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021786; NONHSAT033666
Alternative gene names: XLOC_010384; linc-NUDT15-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.247 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRCH1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRCH1-1:1
3.1 lnc-LRCH1-1:1
4.0 lnc-LRCH1-1:1
4.1 lnc-LRCH1-1:1
5.0 lnc-LRCH1-1:1
5.1 lnc-KL-156:1
5.2 lnc-LRCH1-1:1