Transcript: lnc-LRP12-4:2

Basic information

LNCipedia transcript ID: lnc-LRP12-4:2 
LNCipedia gene ID: lnc-LRP12-4
Ensembl Gene ID: ENSG00000179577
Ensembl Transcript ID: ENST00000319051
Location (hg19): chr8:105431740-105433728
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1988 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000319051.3
Alternative gene names: ENSG00000179577.3; KB-1552D7.2; AP003471.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.8787 non-coding 
CPAT coding probability 1.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRP12-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LRP12-4:2
4.1 lnc-LRP12-4:2
5.0 lnc-LRP12-4:2
5.1 lnc-ZNF706-98:1
5.2 lnc-LRP12-4:2