Transcript: lnc-LRP1B-4:2

Basic information

LNCipedia transcript ID: lnc-LRP1B-4:2 
LNCipedia gene ID: lnc-LRP1B-4
Location (hg19): chr2:143628157-143628636
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 331 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT074714; FPKM1_group_17318_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.8578 non-coding 
CPAT coding probability 1.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRP1B-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRP1B-4:2
4.0 lnc-LRP1B-4:2
4.1 lnc-LRP1B-4:2
5.0 lnc-LRP1B-4:2
5.1 lnc-MMADHC-115:7
5.2 lnc-LRP1B-4:2