Transcript: lnc-LRP5L-17:1

Basic information

LNCipedia transcript ID: lnc-LRP5L-17:1 
LNCipedia gene ID: lnc-LRP5L-17
Ensembl Gene ID: ENSG00000278960
Ensembl Transcript ID: ENST00000624255
Location (hg19): chr22:26152285-26152636
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 352 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624255.1
Alternative gene names: ENSG00000278960.1; CTA-407F11.9; AL022329.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -208.327 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRP5L-17:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LRP5L-17:1
4.1 lnc-LRP5L-17:1
5.0 lnc-LRP5L-17:1
5.1 lnc-PITPNB-51:1
5.2 lnc-LRP5L-17:1