Transcript: lnc-LRRC24-2:4

Basic information

LNCipedia transcript ID: lnc-LRRC24-2:4 
LNCipedia gene ID: lnc-LRRC24-2
Location (hg19): chr8:145741629-145743012
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 725 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000534538.1; RECQL4-004; OTTHUMT00000382490.1; NONHSAT129787
Alternative gene names: ENSG00000160957.7; RECQL4; OTTHUMG00000165178.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -394.0358 non-coding 
CPAT coding probability 9.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC24-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2517M22.14.1-2:4
4.0 lnc-LRRC24-2:4
4.1 lnc-LRRC24-2:4
5.0 lnc-LRRC24-2:4
5.1 lnc-TMEM249-22:1
5.2 lnc-LRRC24-2:4