Transcript: lnc-LRRC24-3:3

Basic information

LNCipedia transcript ID: lnc-LRRC24-3:3 
LNCipedia gene ID: lnc-LRRC24-3
Location (hg19): chr8:145736677-145738096
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 781 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000301323.3; RECQL4-013; OTTHUMT00000397531.1
Alternative gene names: ENSG00000160957.7; RECQL4; OTTHUMG00000165178.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 778.7065 coding 
CPAT coding probability 93.83% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LRRC24-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTD-2517M22.14.1-2:10
4.0 lnc-LRRC24-2:12
4.1 lnc-LRRC24-2:12
5.0 lnc-LRRC24-2:12
5.1 lnc-TMEM249-21:3
5.2 lnc-LRRC24-3:3