Transcript: lnc-LRRC3-6:2

Basic information

LNCipedia transcript ID: lnc-LRRC3-6:2 
LNCipedia gene ID: lnc-LRRC3-6
Location (hg19): chr21:45837996-45841691
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 1014 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002zhn_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.2622 non-coding 
CPAT coding probability 2.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC3-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC3-6:2
4.0 lnc-LRRC3-6:2
4.1 lnc-LRRC3-6:2
5.0 lnc-LRRC3-6:2
5.1 lnc-RRP1-29:2
5.2 lnc-LRRC3-6:2