Transcript: lnc-LRRC4C-10:4

Basic information

LNCipedia transcript ID: lnc-LRRC4C-10:4 
LNCipedia gene ID: lnc-LRRC4C-10
Location (hg19): chr11:39029312-39183403
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 688 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000005325.1|ENCT00000077084.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.7495 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC4C-10:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LRRC4C-10:4
5.0 lnc-LRRC4C-10:4
5.1 lnc-RAG2-10:4
5.2 lnc-LRRC4C-10:4