Transcript: lnc-LRRC61-2:1

Basic information

LNCipedia transcript ID: lnc-LRRC61-2:1 
LNCipedia gene ID: lnc-LRRC61-2
Location (hg19): chr7:150040315-150054583
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 612 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00013626
Alternative gene names: XLOC_006291; linc-REPIN1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.2058 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC61-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRRC61-1:1
3.1 lnc-LRRC61-2:1
4.0 lnc-LRRC61-2:1
4.1 lnc-LRRC61-2:1
5.0 lnc-LRRC61-2:1
5.1 lnc-GIMAP2-17:1
5.2 lnc-LRRC61-2:1