Transcript: lnc-LRRC63-6:2

Basic information

LNCipedia transcript ID: lnc-LRRC63-6:2 
LNCipedia gene ID: lnc-LRRC63-6
Location (hg19): chr13:46961502-46966917
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5416 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000014677.1|ENCT00000112309.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 46.4749 non-coding 
CPAT coding probability 2.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LRRC63-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LRRC63-6:2
5.0 lnc-LRRC63-6:2
5.1 lnc-KL-149:2
5.2 lnc-LRRC63-6:2