Transcript: lnc-LRRC75A-1:2

Basic information

LNCipedia transcript ID: lnc-LRRC75A-1:2 
LNCipedia gene ID: lnc-LRRC75A-1
Ensembl Gene ID: ENSG00000266651
Ensembl Transcript ID: ENST00000585048
Location (hg19): chr17:16343793-16344266
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 304 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000585048.1; RP11-138I1.3-001; OTTHUMT00000445767.1; NONHSAT145973
Alternative gene names: ENSG00000266651.1; RP11-138I1.3; OTTHUMG00000179325.1; AC093484.5; AC093484.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -36.5104 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC75A-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM211A-1:1
4.0 lnc-FAM211A-1:1
4.1 lnc-FAM211A-1:1
5.0 lnc-FAM211A-1:1
5.1 lnc-COPS3-41:2
5.2 lnc-LRRC75A-1:2