Transcript: lnc-LRRC8D-3:4

Basic information

LNCipedia transcript ID: lnc-LRRC8D-3:4 
LNCipedia gene ID: lnc-LRRC8D-3
Location (hg19): chr1:90224276-90227625
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 288 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001023; NONHSAT004376
Alternative gene names: XLOC_000290; linc-LRRC8D-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -427.7649 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC8D-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRRC8D-3:1
3.1 lnc-LRRC8D-3:1
4.0 lnc-LRRC8C-3:3
4.1 lnc-LRRC8C-3:3
5.0 lnc-LRRC8C-3:3
5.1 lnc-ZNF326-3:2
5.2 lnc-LRRC8D-3:4