Transcript: lnc-LRRFIP1-3:4

Basic information

LNCipedia transcript ID: lnc-LRRFIP1-3:4 
LNCipedia gene ID: lnc-LRRFIP1-3
Location (hg19): chr2:238512524-238521151
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3179 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227107.1|ENCT00000237590.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.7325 non-coding 
CPAT coding probability 14.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRFIP1-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC104667.3.1-3:3
5.0 lnc-AC104667.3.1-3:3
5.1 lnc-SCLY-11:3
5.2 lnc-LRRFIP1-3:4