Transcript: lnc-LRRTM2-1:9

Basic information

LNCipedia transcript ID: lnc-LRRTM2-1:9 
LNCipedia gene ID: lnc-LRRTM2-1
RefSeq ID: NR_134245
Location (hg19): chr5:138080119-138088998
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 591 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134245.1
Alternative gene names: LOC105379194


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -7.5421 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRTM2-1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-DND1-50:7
5.1 lnc-DND1-50:7
5.2 lnc-LRRTM2-1:9