Transcript: lnc-LRSAM1-3:1

Basic information

LNCipedia transcript ID: lnc-LRSAM1-3:1 
LNCipedia gene ID: lnc-LRSAM1-3
Location (hg19): chr9:130342586-130343799
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1082 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT134822
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -81.3381 non-coding 
CPAT coding probability 5.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRSAM1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STXBP1-2:2
4.0 lnc-STXBP1-2:2
4.1 lnc-STXBP1-2:2
5.0 lnc-STXBP1-2:2
5.1 lnc-PTPA-97:1
5.2 lnc-LRSAM1-3:1