Transcript: lnc-LSMEM1-2:4

Basic information

LNCipedia transcript ID: lnc-LSMEM1-2:4 
LNCipedia gene ID: lnc-LSMEM1-2
Location (hg19): chr7:112258108-112260699
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 463 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00014195
Alternative gene names: XLOC_006210; linc-FOXP2-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.1214 non-coding 
CPAT coding probability 8.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LSMEM1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C7orf53-2:3
3.1 lnc-C7orf53-2:3
4.0 lnc-C7orf53-2:3
4.1 lnc-C7orf53-2:3
5.0 lnc-C7orf53-2:3
5.1 lnc-MDFIC-16:4
5.2 lnc-LSMEM1-2:4