Transcript: lnc-LSMEM1-3:3

Basic information

LNCipedia transcript ID: lnc-LSMEM1-3:3 
LNCipedia gene ID: lnc-LSMEM1-3
Location (hg19): chr7:112262436-112348122
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1172 bp
Exons: 8
Sources: Refseq - Dec 2014
Alternative transcript names: NR_110158
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.5401 non-coding 
CPAT coding probability 5.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LSMEM1-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C7orf53-3:3
4.0 lnc-C7orf53-3:3
4.1 lnc-C7orf53-3:3
5.0 lnc-C7orf53-3:3
5.1 lnc-MDFIC-15:3
5.2 lnc-LSMEM1-3:3