Transcript: lnc-LSMEM1-3:4

Basic information

LNCipedia transcript ID: lnc-LSMEM1-3:4 
LNCipedia gene ID: lnc-LSMEM1-3
RefSeq ID: NR_110158
Location (hg19): chr7:112262436-112348127
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1177 bp
Exons: 8
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110158.1
Alternative gene names: LOC101928012


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -83.5401 non-coding 
CPAT coding probability 2.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LSMEM1-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MDFIC-15:4
5.1 lnc-MDFIC-15:4
5.2 lnc-LSMEM1-3:4