Transcript: lnc-LY6G6E-1:1

Basic information

LNCipedia transcript ID: lnc-LY6G6E-1:1 
LNCipedia gene ID: lnc-LY6G6E-1
Location (hg19): chr6:31654739-31681849
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2332 bp
Exons: 22
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000461287.1; LY6G6E-001; OTTHUMT00000328320.3
Alternative gene names: ENSG00000204422.7; LY6G6E; OTTHUMG00000031253.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4464.1105 coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LY6G6E-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LY6G6E.7-1:1
4.0 lnc-LY6G6E.7-1:1
4.1 lnc-LY6G6E.7-1:1
5.0 lnc-LY6G6E.7-1:1
5.1 lnc-VWA7-6:1
5.2 lnc-LY6G6E-1:1