Transcript: lnc-LYPD6-15:1

Basic information

LNCipedia transcript ID: lnc-LYPD6-15:1 
LNCipedia gene ID: lnc-LYPD6-15
Location (hg19): chr2:151186642-151187912
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 942 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT074928; FPKM1_group_17395_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -84.7233 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYPD6-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYPD6-15:1
4.0 lnc-LYPD6-15:1
4.1 lnc-LYPD6-15:1
5.0 lnc-LYPD6-15:1
5.1 lnc-KCNJ3-35:1
5.2 lnc-LYPD6-15:1