Transcript: lnc-LYPLA1-7:1

Basic information

LNCipedia transcript ID: lnc-LYPLA1-7:1 
LNCipedia gene ID: lnc-LYPLA1-7
Location (hg19): chr8:55392157-55392523
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 367 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT126637
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
CTTCCSSWMC 100% sense-1
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.5378 non-coding 
CPAT coding probability 77.88% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LYPLA1-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYPLA1-7:1
4.0 lnc-LYPLA1-7:1
4.1 lnc-LYPLA1-7:1
5.0 lnc-LYPLA1-7:1
5.1 lnc-IMPAD1-35:1
5.2 lnc-LYPLA1-7:1