Transcript: lnc-LYRM4-3:4

Basic information

LNCipedia transcript ID: lnc-LYRM4-3:4 
LNCipedia gene ID: lnc-LYRM4-3
RefSeq ID: NR_125847
Location (hg19): chr6:5452701-5458308
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 545 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125847; NR_125847.1
Alternative gene names: LOC101927972


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -156.4978 non-coding 
CPAT coding probability 0.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYRM4-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYRM4-3:4
4.0 lnc-LYRM4-3:4
4.1 lnc-LYRM4-3:4
5.0 lnc-LYRM4-3:4
5.1 lnc-ECI2-101:3
5.2 lnc-LYRM4-3:4