Transcript: lnc-LYRM4-3:5

Basic information

LNCipedia transcript ID: lnc-LYRM4-3:5 
LNCipedia gene ID: lnc-LYRM4-3
RefSeq ID: NR_125846
Location (hg19): chr6:5452701-5458308
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 548 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125846; NR_125846.1
Alternative gene names: LOC101927972


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -156.4978 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYRM4-3:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYRM4-3:5
4.0 lnc-LYRM4-3:5
4.1 lnc-LYRM4-3:5
5.0 lnc-LYRM4-3:5
5.1 lnc-ECI2-101:2
5.2 lnc-LYRM4-3:5