Transcript: lnc-LYSMD3-2:5

Basic information

LNCipedia transcript ID: lnc-LYSMD3-2:5 
LNCipedia gene ID: lnc-LYSMD3-2
Location (hg19): chr5:90671344-90675968
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 587 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT102761
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -123.8853 non-coding 
CPAT coding probability 8.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LYSMD3-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYSMD3-2:2
4.0 lnc-AC027323.1-2:2
4.1 lnc-AC027323.1-2:2
5.0 lnc-AC027323.1-2:2
5.1 lnc-ANKRD34B-174:2
5.2 lnc-LYSMD3-2:5