Transcript: lnc-LYSMD4-2:6

Basic information

LNCipedia transcript ID: lnc-LYSMD4-2:6 
LNCipedia gene ID: lnc-LYSMD4-2
Location (hg19): chr15:100338328-100341384
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 882 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT051044
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 84.0626 coding 
CPAT coding probability 90.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LYSMD4-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LYSMD4-2:6
4.0 lnc-LYSMD4-2:6
4.1 lnc-LYSMD4-2:6
5.0 lnc-LYSMD4-2:6
5.1 lnc-CIB1-96:6
5.2 lnc-LYSMD4-2:6