Transcript: lnc-MAB21L1-1:1

Basic information

LNCipedia transcript ID: lnc-MAB21L1-1:1 
LNCipedia gene ID: lnc-MAB21L1-1
Location (hg19): chr13:35621967-35623401
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 503 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000430191.1; NBEA-AS1-001; OTTHUMT00000044456.1; NONHSAT033176
Alternative gene names: ENSG00000225474.1; NBEA-AS1; OTTHUMG00000016720.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.7766 non-coding 
CPAT coding probability 5.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAB21L1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAB21L1-1:1
4.0 lnc-MAB21L1-1:1
4.1 lnc-MAB21L1-1:1
5.0 lnc-MAB21L1-1:1
5.1 lnc-CCDC169-20:1
5.2 lnc-MAB21L1-1:1