Transcript: lnc-MACC1-1:10

Basic information

LNCipedia transcript ID: lnc-MACC1-1:10 
LNCipedia gene ID: lnc-MACC1-1
RefSeq ID: NR_110114
Location (hg19): chr7:19958604-20180049
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 822 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110114; NR_110114.1
Alternative gene names: LOC101927668


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.9776 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MACC1-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MACC1-1:10
4.0 lnc-MACC1-1:10
4.1 lnc-MACC1-1:10
5.0 lnc-MACC1-1:10
5.1 lnc-SNX13-16:7
5.2 lnc-MACC1-1:10