Transcript: lnc-MACC1-1:12

Basic information

LNCipedia transcript ID: lnc-MACC1-1:12 
LNCipedia gene ID: lnc-MACC1-1
Location (hg19): chr7:20068537-20085544
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 465 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT119405; FPKM1_group_29272_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.0507 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MACC1-1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MACC1-1:12
4.0 lnc-MACC1-1:12
4.1 lnc-MACC1-1:12
5.0 lnc-MACC1-1:12
5.1 lnc-SNX13-16:12
5.2 lnc-MACC1-1:12