Transcript: lnc-MAD2L1-3:1

Basic information

LNCipedia transcript ID: lnc-MAD2L1-3:1 
LNCipedia gene ID: lnc-MAD2L1-3
Location (hg19): chr4:120939709-120945118
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 533 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003idk_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -146.8677 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAD2L1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAD2L1-3:1
4.0 lnc-MAD2L1-3:1
4.1 lnc-MAD2L1-3:1
5.0 lnc-MAD2L1-3:1
5.1 lnc-PDE5A-8:1
5.2 lnc-MAD2L1-3:1