Transcript: lnc-MAFA-3:2

Basic information

LNCipedia transcript ID: lnc-MAFA-3:2 
LNCipedia gene ID: lnc-MAFA-3
Location (hg19): chr8:144521300-144522174
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 765 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT129577
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.932 non-coding 
CPAT coding probability 24.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAFA-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAFA-3:2
4.0 lnc-MAFA-3:2
4.1 lnc-MAFA-3:2
5.0 lnc-MAFA-3:2
5.1 lnc-LYNX1-18:2
5.2 lnc-MAFA-3:2